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Organism
Bos taurus ARS-UCD 1.3 (6,001)
Bos taurus UMD 3.1 (4,865)
Feature type (7)
QTL (6,336)
SNV (867)
copy_number_variation (126)
gene (1,140)
lncRNA (158)
mRNA (2,161)
ncRNA_gene (78)
Analyses
no diamond matches (10,866)
no interproscan matches (10,866)
DOI (29)
Bivariate GWAS reveals pleiotropic regions among feed efficiency and beef quality-related traits in Nelore cattle (1)
Interplay among miR-29 family, mineral metabolism, and gene regulation in Bos indicus muscle (84)
Repressive epigenetic mechanisms, such as the H3K27me3 histone modification, were predicted to affect muscle gene expression and its mineral content in Nelore cattle (27)
Proteome alterations associated with the oleic acid and cis-9, trans-11 conjugated linoleic acid content in bovine skeletal muscle (3)
Calcium and potassium content in beef: Influences on tenderness and associations with molecular markers in Nellore cattle (1)
Widespread modulation of gene expression by copy number variation in skeletal muscle (9)
A comprehensive manually-curated compendium of bovine transcription factors (19)
Muscle transcriptome analysis reveals genes and metabolic pathways related to mineral concentration in Bos indicus (9)
Genetic regulators of mineral amount in Nelore cattle muscle predicted by a new co-expression and regulatory impact factor approach (9)
Allele-specific expression is widespread in Bos indicus muscle and affects meat quality candidate genes (23)
Muscle allele-specific expression QTLs may affect meat quality traits in Bos indicus (4)
Novel putative causal mutations associated with fat traits in Nellore cattle uncovered by eQTLs located in open chromatin regions (189)
Gene expression differences in Longissimus muscle of Nelore steers genetically divergent for residual feed intake (1)
De novo assembly of the cattle reference genome with single-molecule sequencing (2,565)
PSX-3 Transcriptional response to an alternative diet on liver, muscle, and rumen of beef cattle (16)
Bringing the Animal QTLdb and CorrDB into the future: meeting new challenges and providing updated services (6,336)
A whole-genome assembly of the domestic cow, Bos taurus. (998)
Global liver gene expression differences in Nelore steers with divergent residual feed intake phenotypes (1)
Differences in the skeletal muscle transcriptome profile associated with extreme values of fatty acids content (47)
Comparative muscle transcriptome associated with carcass traits of Nellore cattle (3)
Identification of putative regulatory regions and transcription factors associated with intramuscular fat content traits (34)
Gene co-expression networks associated with carcass traits reveal new pathways for muscle and fat deposition in Nelore cattle (6)
DNA methylation may affect beef tenderness through signal transduction in Bos indicus (33)
Iron Content Affects Lipogenic Gene Expression in the Muscle of Nelore Beef Cattle (2)
Gene Co-expression Analysis Indicates Potential Pathways and Regulators of Beef Tenderness in Nellore Cattle (15)
Potential Biomarkers for Feed Efficiency-Related Traits in Nelore Cattle Identified by Co-expression Network and Integrative Genomics Analyses (9)
Integrative Analysis Between Genome-Wide Association Study and Expression Quantitative Trait Loci Reveals Bovine Muscle Gene Expression Regulatory Polymorphisms Associated With Intramuscular Fat and Backfat Thickness (16)
Differential Allele-Specific Expression Revealed Functional Variants and Candidate Genes Related to Meat Quality Traits in B. indicus Muscle (108)
Genotypic and allelic frequencies of gene polymorphisms associated with meat tenderness in Nellore beef cattle (4)

Search Results

Showing page 75 of 109
Organism Feature Type Feature ID Info Relationship Display
Bos taurus UMD 3.1 SNV Hapmap28443-BTA-164160 C->G
Bos taurus UMD 3.1 SNV Hapmap39759-BTA-54112 T->G
Bos taurus ARS-UCD 1.3 SNV Hapmap39759-BTA-54112 T->G
Bos taurus ARS-UCD 1.3 SNV Hapmap41060-BTA-68516 G->A
Bos taurus UMD 3.1 SNV Hapmap43778-BTA-117655 T->C
Bos taurus ARS-UCD 1.3 SNV Hapmap44050-BTA-27088 G->A
Bos taurus UMD 3.1 SNV Hapmap44050-BTA-27088 G->A
Bos taurus UMD 3.1 SNV Hapmap45233-BTA-100751 G->C
Bos taurus ARS-UCD 1.3 SNV Hapmap45233-BTA-100751 G->C
Bos taurus ARS-UCD 1.3 SNV Hapmap45306-BTA-65657 G->C
Bos taurus ARS-UCD 1.3 SNV Hapmap45337-BTA-109277 C->G
Bos taurus UMD 3.1 SNV Hapmap45337-BTA-109277 C->G
Bos taurus ARS-UCD 1.3 SNV Hapmap48501-BTA-87072 C->T
Bos taurus UMD 3.1 SNV Hapmap48561-BTA-101890 G->A
Bos taurus ARS-UCD 1.3 SNV Hapmap48561-BTA-101890 G->A
Bos taurus ARS-UCD 1.3 SNV Hapmap50607-BTA-17724 A->G
Bos taurus UMD 3.1 SNV Hapmap50607-BTA-17724 A->G
Bos taurus UMD 3.1 SNV Hapmap53248-rs29027060 C->T
Bos taurus ARS-UCD 1.3 SNV Hapmap53248-rs29027060 C->T
Bos taurus ARS-UCD 1.3 SNV Hapmap53755-rs29023406 C->T
Bos taurus UMD 3.1 SNV Hapmap53755-rs29023406 C->T
Bos taurus ARS-UCD 1.3 SNV Hapmap54575-rs29011158 C->T
Bos taurus UMD 3.1 SNV Hapmap54575-rs29011158 C->T
Bos taurus UMD 3.1 SNV Hapmap57622-rs29026935 T->C
Bos taurus ARS-UCD 1.3 SNV Hapmap57622-rs29026935 T->C
Bos taurus ARS-UCD 1.3 SNV rs207793144 T->C
Bos taurus UMD 3.1 SNV rs210072660 A->G
Bos taurus UMD 3.1 SNV rs41655256 T->G
Bos taurus ARS-UCD 1.3 copy_number_variation CNVR_1925
Bos taurus ARS-UCD 1.3 copy_number_variation CNVR_2414
Bos taurus ARS-UCD 1.3 copy_number_variation CNVR_2766
Bos taurus ARS-UCD 1.3 copy_number_variation CNVR_2918
Bos taurus ARS-UCD 1.3 copy_number_variation CNVR_437
Bos taurus ARS-UCD 1.3 copy_number_variation CNVR_489
Bos taurus UMD 3.1 gene ENSBTAG00000000064 FEN1 mRNA flap structure-specific endonuclease 1 [Source:VGNC Symbol;Acc:VGNC:28947]
Bos taurus ARS-UCD 1.3 gene ENSBTAG00000002306 UTP11 mRNA UTP11 small subunit processome component [Source:VGNC Symbol;Acc:VGNC:36741]
Bos taurus UMD 3.1 gene ENSBTAG00000002306 UTP11 mRNA UTP11, small subunit processome component [Source:VGNC Symbol;Acc:VGNC:36741]
Bos taurus UMD 3.1 gene ENSBTAG00000010514 ASB7 mRNA ankyrin repeat and SOCS box containing 7 [Source:VGNC Symbol;Acc:VGNC:26200]
Bos taurus ARS-UCD 1.3 gene ENSBTAG00000010514 ASB7 mRNA mRNA mRNA mRNA mRNA ankyrin repeat and SOCS box containing 7 [Source:VGNC Symbol;Acc:VGNC:26200]
Bos taurus ARS-UCD 1.3 gene ENSBTAG00000020026 C3H1orf43 mRNA mRNA mRNA mRNA mRNA mRNA chromosome 3 C1orf43 homolog [Source:VGNC Symbol;Acc:VGNC:59177]
Bos taurus UMD 3.1 gene ENSBTAG00000020552 PRDM2 mRNA PR/SET domain 2 [Source:VGNC Symbol;Acc:VGNC:33295]
Bos taurus UMD 3.1 gene ENSBTAG00000026953 mRNA
Bos taurus ARS-UCD 1.3 gene ENSBTAG00000047331 mRNA mRNA
Bos taurus ARS-UCD 1.3 gene ENSBTAG00000058945 mRNA
Bos taurus ARS-UCD 1.3 ncRNA_gene ENSBTAG00000059590 lncRNA lncRNA lncRNA lncRNA lncRNA
Bos taurus ARS-UCD 1.3 gene ENSBTAG00000060781 mRNA
Bos taurus ARS-UCD 1.3 gene ENSBTAG00000061507 CDH19 mRNA mRNA cadherin 19 [Source:HGNC Symbol;Acc:HGNC:1758]
Bos taurus ARS-UCD 1.3 ncRNA_gene ENSBTAG00000061640 lncRNA
Bos taurus ARS-UCD 1.3 ncRNA_gene ENSBTAG00000061665 lncRNA lncRNA lncRNA lncRNA lncRNA
Bos taurus ARS-UCD 1.3 gene ENSBTAG00000063800 mRNA mRNA mRNA
Bos taurus ARS-UCD 1.3 ncRNA_gene ENSBTAG00000069497 lncRNA lncRNA
Bos taurus ARS-UCD 1.3 mRNA ENSBTAT00000065212 gene polypeptide
Bos taurus ARS-UCD 1.3 mRNA ENSBTAT00000069691 gene polypeptide
Bos taurus ARS-UCD 1.3 mRNA ENSBTAT00000070145 C3H1orf43-204 gene polypeptide
Bos taurus ARS-UCD 1.3 mRNA ENSBTAT00000072579 C3H1orf43-205 gene polypeptide
Bos taurus ARS-UCD 1.3 lncRNA ENSBTAT00000091521 ncRNA_gene
Bos taurus ARS-UCD 1.3 mRNA ENSBTAT00000104785 C3H1orf43-201 gene polypeptide
Bos taurus ARS-UCD 1.3 mRNA ENSBTAT00000105397 gene polypeptide
Bos taurus ARS-UCD 1.3 mRNA ENSBTAT00000108814 C3H1orf43-202 gene polypeptide
Bos taurus ARS-UCD 1.3 lncRNA ENSBTAT00000114721 ncRNA_gene
Bos taurus ARS-UCD 1.3 lncRNA ENSBTAT00000121859 ncRNA_gene
Bos taurus ARS-UCD 1.3 lncRNA ENSBTAT00000123345 ncRNA_gene
Bos taurus ARS-UCD 1.3 lncRNA ENSBTAT00000125082 ncRNA_gene
Bos taurus ARS-UCD 1.3 lncRNA ENSBTAT00000131385 ncRNA_gene
Bos taurus ARS-UCD 1.3 lncRNA ENSBTAT00000131525 ncRNA_gene
Bos taurus ARS-UCD 1.3 mRNA ENSBTAT00000134350 gene polypeptide
Bos taurus ARS-UCD 1.3 QTL 20761 Shear force
Bos taurus UMD 3.1 QTL 20761 Shear force
Bos taurus ARS-UCD 1.3 QTL 20812 Shear force
Bos taurus UMD 3.1 QTL 20812 Shear force
Bos taurus UMD 3.1 QTL 20825 Shear force
Bos taurus ARS-UCD 1.3 QTL 20825 Shear force
Bos taurus UMD 3.1 QTL 20830 Shear force
Bos taurus ARS-UCD 1.3 QTL 20830 Shear force
Bos taurus UMD 3.1 QTL 225823 Shear force
Bos taurus ARS-UCD 1.3 QTL 225823 Shear force
Bos taurus UMD 3.1 QTL 36384 Shear force
Bos taurus ARS-UCD 1.3 QTL 36384 Shear force
Bos taurus UMD 3.1 QTL 36421 Shear force
Bos taurus ARS-UCD 1.3 QTL 36421 Shear force
Bos taurus UMD 3.1 SNV ARS-BFGL-NGS-104159 A->G
Bos taurus ARS-UCD 1.3 SNV ARS-BFGL-NGS-104159 A->G
Bos taurus UMD 3.1 SNV ARS-BFGL-NGS-117653 G->T
Bos taurus UMD 3.1 SNV ARS-BFGL-NGS-29837 G->A
Bos taurus UMD 3.1 SNV ARS-BFGL-NGS-56898 T->C
Bos taurus UMD 3.1 SNV BTA-30359-no-rs C->T
Bos taurus ARS-UCD 1.3 SNV BTA-30359-no-rs C->T
Bos taurus ARS-UCD 1.3 copy_number_variation CNVR_1656
Bos taurus ARS-UCD 1.3 copy_number_variation CNVR_2779
Bos taurus ARS-UCD 1.3 copy_number_variation CNVR_3793
Bos taurus ARS-UCD 1.3 copy_number_variation CNVR_531
Bos taurus UMD 3.1 gene ENSBTAG00000004855 PRDX6 mRNA peroxiredoxin 6 [Source:VGNC Symbol;Acc:VGNC:33304]
Bos taurus UMD 3.1 gene ENSBTAG00000005392 KBTBD3 mRNA kelch repeat and BTB domain containing 3 [Source:VGNC Symbol;Acc:VGNC:30416]
Bos taurus ARS-UCD 1.3 gene ENSBTAG00000005578 KAT5 mRNA mRNA mRNA lysine acetyltransferase 5 [Source:VGNC Symbol;Acc:VGNC:30400]
Bos taurus UMD 3.1 gene ENSBTAG00000008815 WDR89 mRNA WD repeat domain 89 [Source:VGNC Symbol;Acc:VGNC:36925]
Bos taurus UMD 3.1 gene ENSBTAG00000010256 TMEM170B mRNA transmembrane protein 170B [Source:VGNC Symbol;Acc:VGNC:54241]
Bos taurus UMD 3.1 gene ENSBTAG00000018828 ATN1 mRNA atrophin 1 [Source:VGNC Symbol;Acc:VGNC:26269]
Bos taurus ARS-UCD 1.3 gene ENSBTAG00000019133 ZNF326 mRNA mRNA mRNA zinc finger protein 326 [Source:VGNC Symbol;Acc:VGNC:37248]
Bos taurus ARS-UCD 1.3 gene ENSBTAG00000019524 ITGAD mRNA integrin subunit alpha D [Source:VGNC Symbol;Acc:VGNC:55055]
Bos taurus UMD 3.1 gene ENSBTAG00000021051 ZNHIT6 mRNA zinc finger HIT-type containing 6 [Source:VGNC Symbol;Acc:VGNC:37361]
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