Bos taurus ARS-UCD 1.3

gene: PTP4A1

ID: ENSBTAG00000002275
Description: protein tyrosine phosphatase 4A1 [Source:VGNC Symbol;Acc:VGNC:33523]

DBxRefs: refseq:NP_001193053 refseq:NP_001341521 refseq:XP_024852587

Mrna: ENSBTAT00000002933
Mrna: ENSBTAT00000090457

  • Gene regulated by SNPs acting as trans-eQTL in muscle sample from Nelore cattle (rs798518493, rs522446737, novel_variant (2:22411347), rs1115589158, rs133902466, rs463787996, rs477511887, rs474518096, rs110485812, rs110325612, rs109911066, rs109701761, rs109569107, rs723415992, novel_variant (4:40383322), rs137425174, rs134266004, rs134329640, rs133127591, rs42489021, rs136542545, rs133878365, rs109202742, rs136843777, rs109531320, rs109549351, rs526743531, novel_variant (10:38403400), novel_variant (10:38403413), novel_variant (13:77149844), novel_variant (13:77375455), rs517608212, rs721652063, rs42429785, rs42429784, rs42429783, rs109829100, rs137340829, rs109743481, rs41931736, rs135868090, rs42949181, rs134248578, rs526765486, rs42884751, rs42884742) (DOI:10.3389/fgene.2022.935238)
  • Gene predicted to be targeted by miRNA (bta-miR-19a, bta-miR-19b, bta-miR-30c, bta-miR-30f) (DOI:10.1007/s00438-020-01683-9)
  • Gene being affected by a trans eQTLs (rs1115589158, rs463787996, rs519518265, rs720375177, rs445170058, rs723566294) in Nelore muscle samples (DOI:10.1038/s41598-024-60703-5)

Location

9:453115..458072 1