Bos taurus ARS-UCD 1.3

gene: CNOT2

ID: ENSBTAG00000003748
Description: CCR4-NOT transcription complex subunit 2 [Source:VGNC Symbol;Acc:VGNC:27517]

DBxRefs: refseq:XM_024991916 refseq:NP_001096747 refseq:XM_024991917 refseq:XP_024847685 refseq:XM_024991919 refseq:XP_024847687 refseq:XP_024847684 refseq:NM_001103277 refseq:XM_059886541 refseq:XP_059742524 refseq:XM_024991921 refseq:XP_024847689

Mrna: ENSBTAT00000085100
Mrna: ENSBTAT00000069690
Mrna: ENSBTAT00000057053
Mrna: ENSBTAT00000004880
Mrna: ENSBTAT00000071934

  • Gene regulated by SNPs acting as trans-eQTL in muscle sample from Nelore cattle (rs382873332, rs109323139, novel_variant (2:22411347), rs134334593, rs137040479, rs133902466, rs463787996, rs477511887, rs474518096, rs715709191, rs109569107, rs520119011, rs137041971, rs110700093, rs135115431, rs132714474, rs134666833, rs109788893, rs134266004, rs134329640, rs42489021, rs136542545, rs133878365, rs109202742, rs136843777, rs42595915, rs109531320, rs43540117, rs135931806, rs109549351, rs134003345, rs137639653, rs526743531, rs132809418, rs109157366, novel_variant (10:38403400), rs442297481, rs714654715, novel_variant (11:98750974), rs720887082, rs133134363, rs41687797, rs42078631, rs135227037, rs137416807, novel_variant (13:77149844), novel_variant (13:77375455), rs517608212, rs1118074239, novel_variant (16:51643343), rs41832118, rs42429784, rs42429783, rs109829100, rs137340829, rs109743481, rs41928688, rs134340361, rs41931736, rs526765486, rs42884751, rs42884742, rs133356472, rs383913681, rs43152448, rs798549164, rs42194371) (DOI:10.3389/fgene.2022.935238)
  • Gene being affected by a cis eQTLs (rs472494310, rs134088759)in Nelore muscle samples (DOI:10.1038/s41598-024-60703-5)
  • Gene being affected by a trans eQTLs (rs382873332, rs463787996, rs715709191, rs522185904, rs1116534251, rs41928688, rs445170058, rs526169542, rs526765486, rs382976922) in Nelore muscle samples (DOI:10.1038/s41598-024-60703-5)

Location

5:43134291..43266502 -1