Bos taurus ARS-UCD 1.3

gene: SHOC2

ID: ENSBTAG00000007709
Description: SHOC2 leucine rich repeat scaffold protein [Source:VGNC Symbol;Acc:VGNC:34605]

DBxRefs: refseq:NP_001095413 refseq:NM_001101943 refseq:XM_010820029 refseq:XM_059881818 refseq:XP_005225784 refseq:XP_010818331 refseq:XP_059737801

Mrna: ENSBTAT00000010138
Mrna: ENSBTAT00000108174
Mrna: ENSBTAT00000095440

  • Gene regulated by SNPs acting as trans-eQTL in muscle sample from Nelore cattle (rs109323139, rs482234950, rs133902466, rs463787996, rs477511887, rs474518096, rs110485812, rs110325612, rs109911066, rs136548029, rs109569107, novel_variant (4:40383322), rs208247549, rs135115431, rs132714474, rs137425174, rs134266004, rs134329640, rs133127591, rs42489021, rs136542545, rs133878365, rs720788649, rs43540117, rs109549351, rs134003345, rs526743531, novel_variant (10:38403400), novel_variant (13:77375455), rs517608212, rs110789476, rs109829100, rs137340829, rs109743481, rs41928688, rs41931736, rs526765486, rs42884742, rs518882960, novel_variant (28:13199522)) (DOI:10.3389/fgene.2022.935238)
  • Gene being affected by a trans eQTLs (rs463787996, rs1117693886, rs723566294, rs445170058) in Nelore muscle samples (DOI:10.1038/s41598-024-60703-5)
  • Gene predicted to be targeted by miRNA (bta-miR-15a, bta-miR-29e) (DOI:10.1007/s00438-020-01683-9)

Location

26:31481195..31568116 1