Bos taurus ARS-UCD 1.3

gene: GALNT1

ID: ENSBTAG00000011206
Description: polypeptide N-acetylgalactosaminyltransferase 1 [Source:VGNC Symbol;Acc:VGNC:29222]

DBxRefs: refseq:NP_803485 refseq:NM_177519 refseq:XM_059880752 refseq:XP_010816977 refseq:XP_059736735 refseq:XP_059736736 refseq:XP_059736737 refseq:XP_059736738 refseq:XP_059736739 refseq:XP_059736740 refseq:XP_059736741 refseq:XP_059736742

Mrna: ENSBTAT00000069475
Mrna: ENSBTAT00000014882

  • Gene regulated by SNPs acting as trans-eQTL in muscle sample from Nelore cattle (novel_variant (2:22411347), rs133902466, rs136315161, rs134329640, rs42489021, rs136542545, rs133878365, rs109202742, rs136843777, rs382320484, novel_variant (10:38403400), novel_variant (10:38403413), novel_variant (10:47001055), rs136650436, rs721132864, rs720887082, novel_variant (16:51643343), rs136926076, rs109063555, rs109993214, rs109755636, rs135171892, rs137827420, rs137429187, rs132908573, rs135766506, rs135822566, rs42431034, rs42431033, rs42429829, rs42429821, rs42429820, rs42429784, rs42429783, rs109829100, rs137340829, rs109743481, rs41931736, rs43415132, rs43152448) (DOI:10.3389/fgene.2022.935238)
  • Gene predicted to be targeted by miRNA (bta-miR-29e) (DOI:10.1007/s00438-020-01683-9)
  • Gene being affected by a cis eQTLs (rs209226415, rs445545564, rs719301852)in Nelore muscle samples (DOI:10.1038/s41598-024-60703-5)
  • Gene being affected by a trans eQTLs (rs463787996, rs721132864, rs136650436, rs720375177, rs445170058, rs715871287, rs721049957) in Nelore muscle samples (DOI:10.1038/s41598-024-60703-5)
  • Gene regulated by SNPs acting as cis-eQTL in muscle sample from Nelore cattle (rs719301852, rs209226415) (DOI:10.3389/fgene.2022.935238)

Location

24:21374862..21444285 -1