Bos taurus ARS-UCD 1.3

gene: SPATA20

ID: ENSBTAG00000004155
Description: spermatosis associated 20 [Source:VGNC Symbol;Acc:VGNC:35179]

Mrna: ENSBTAT00000103462
Mrna: ENSBTAT00000005441
Mrna: ENSBTAT00000070783
Mrna: ENSBTAT00000132589

  • Gene regulated by SNPs acting as trans-eQTL in muscle sample from Nelore cattle (rs43233583, rs721727815, novel_variant (3:28563817), rs714479007, rs523116632, rs520753643, rs523507879, rs520237410, rs525261039, novel_variant (5:112176843), rs134937440, rs136681706, rs134309576, rs520153606, rs209008823, novel_variant (8:88738741), rs379379114, rs450821430, novel_variant (8:90347486), rs717731291, rs721313368, rs479135645, novel_variant (19:25028517), novel_variant (19:26491512), rs720013713, rs440121051, rs211141267, rs715511599, rs718530667, rs210695136, rs718091448, rs109458436, rs110335740, rs444363487, rs720754606, novel_variant (19:33920203), rs721102660, rs714087620, rs522797604, rs714546122, rs518756705, rs516587102, rs720506648, rs459972449, rs721466970, rs714952558, rs722067413, rs452836160, rs719724105, rs718101653, rs518865175, rs527083325, rs449740577, rs715357902, rs470026365, rs457054864, rs435246587, rs518863324, rs523707949, rs721533520, rs718900090, rs440739423, rs517836734, rs721859174, rs714024047, novel_variant (19:34622732), rs718016229, rs715911626, rs723476646, rs723309631, rs714939400, rs718749319, rs721853430, rs439535736, rs715921436, rs723471141, rs717173356, rs452418916, rs41909635, rs517131308, rs439805528, rs714520910, rs718752484, rs432464207, rs520309363, rs798353124, rs719261230, rs521138932, rs524342705, rs526976764, rs721144315, rs723828026, rs522309546, rs449281688, rs1116706489, rs444483011, rs136263241, rs476530789, rs443316820, rs379253194, rs383662775, novel_variant (23:27279369), novel_variant (23:27279655), rs382674901, rs378200767, rs381353174, rs384787643, rs208564835, rs207793144, rs210477149, rs211038500, rs109481570, rs135765307, rs135811950, rs522935478, rs110858120, rs522769160, rs518038150) (DOI:10.3389/fgene.2022.935238)
  • Gene being affected by a cis eQTLs (rs133011339, rs724087925, rs1118162512, rs109586157, rs136038467, rs137797861, rs433626143, rs110592026, rs522306324, rs720816035, rs716926065, rs41910904, rs110726786, rs714666574, rs516939965, rs382252359, rs723817308, rs717739439, rs378962363, rs482465886, rs719675418, rs717755873, rs471505249, rs460216878, rs210384335, rs522305516, rs208721983, rs721388238, rs721937895, rs432923593, rs445545826, rs134454216)in Nelore muscle samples (DOI:10.1038/s41598-024-60703-5)
  • Gene being affected by a trans eQTLs (rs209008823, rs432464207, rs717173356, rs517131308, rs452836160, rs723476646, rs714024047, rs518863324, rs720506648, rs721466970, rs722067413, rs718530667, rs452418916, rs715511599, rs720754606, rs1116706489, rs516587102, rs439805528, rs526976764, rs443316820) in Nelore muscle samples (DOI:10.1038/s41598-024-60703-5)

Location

19:36171018..36179221 -1