Bos taurus ARS-UCD 1.3

gene: SLC6A16

ID: ENSBTAG00000030543
Description: solute carrier family 6 member 16 [Source:VGNC Symbol;Acc:VGNC:52249]

DBxRefs: refseq:XM_010815224 refseq:XM_010815226 refseq:XM_010815227 refseq:XP_010813526 refseq:XP_010813527 refseq:XP_010813528 refseq:XP_010813529

Mrna: ENSBTAT00000099731
Mrna: ENSBTAT00000017256
Mrna: ENSBTAT00000124329

  • Gene regulated by SNPs acting as trans-eQTL in muscle sample from Nelore cattle (rs521616313, rs446057440, rs211597772, rs135313479, novel_variant (18:52426920), novel_variant (18:52427104), rs714728633, rs211341872) (DOI:10.3389/fgene.2022.935238)
  • Gene being affected by a cis eQTLs (rs517927773, rs468246483, rs525494786, rs516279330, rs464060735, rs433438700, rs463906276, rs720021110, rs523322463, rs523473066, rs720518709, rs717253367, rs718445969, rs717204660, rs717662597, rs447989105, rs134462865, rs210403291, rs432357769, rs522734899, rs382640106, rs718309756, rs447031803, rs207846986, rs519154014, rs518586090, rs523929086, rs524642115, rs519549011, rs715271707, rs383967623, rs716722976, rs43705196, rs208926400, rs714115006, rs458777604, rs462519084, rs526970152, rs518461781, rs110386432, rs475525063, rs716297397, rs1115618223, rs208778864, rs718266288, rs41894177, rs41891072, rs718513686, rs439233242, rs381276501, rs41897477, rs520015247, rs110220800, rs482436491, rs460452686, rs525558802, rs382163837, rs527207901, rs207688067, rs136796051, rs517589865, rs210681802, rs526237350, rs525981127)in Nelore muscle samples (DOI:10.1038/s41598-024-60703-5)
  • Gene regulated by SNPs acting as cis-eQTL in muscle sample from Nelore cattle (rs41897477, rs523929086, rs518586090, rs481139930, rs210403291, rs110386432, rs525558802, rs716722976, rs208778864, rs715271707, novel_variant (18:55475654), rs464060735, rs437666940, rs1115618223, rs520063448, rs468246483, rs525494786, rs382163837, rs523180801, rs521489014, rs467909592, rs516105387, rs521169371, rs41891072, rs720106186, rs110896594, rs714763953, rs41891074, rs719689180, rs462519084, rs721951769, rs718513686, rs523322463, rs516027689, rs43705196, rs385535423, rs455147854, rs383535270, rs386107687, rs380488739, rs378340596, rs433438700, rs382134676, novel_variant (18:55549215), rs385100624, rs41891749, rs379370990, rs380995519, rs383365422, rs377931881, rs518461781, rs382640106, rs463906276, rs482436491, rs449418605, rs524127303, rs519729047, rs520967654, rs385940801, rs383500907, rs516279330, novel_variant (18:55614489), novel_variant (18:55615145), rs720518709, rs458777604, rs523473066, rs718309756, rs383371319, rs717201425, rs525245414, rs447989105, rs517927773, novel_variant (18:55827725), novel_variant (18:55827868), rs526970152, novel_variant (18:55828731), rs718445969, rs798783066, rs717662597, rs380571805, rs134424428, rs520015247, rs714115006, novel_variant (18:55920037), rs134462865, rs383967623, rs378452934, rs381276501, rs41894177, rs447031803, rs41894175, rs718266288, rs717204660, rs527207901, rs721484175, rs468360682, rs432357769, rs526248538, rs717253367, rs519549011, rs522734899, rs526237350, rs439233242, rs210681802, rs716297397, rs800441762, rs524642115, rs517270447, rs522838180, rs475525063, rs719853793, rs519229938, rs454299880, rs519812547, rs439791440, rs526971739, rs523274395, rs207893055, rs516725609, rs520255408, rs523800220, rs521517497, rs137631152, rs207550362, rs133515092, rs136432799, rs522694175, rs136538019, novel_variant (18:56598495), novel_variant (18:56598717), rs207846986, rs209122347, rs210377348, rs211341111, rs208092771, rs433343320, rs716860198, rs526539283, rs208926400, rs524108944, rs136796051, rs516839717, rs723203947, rs134629695, rs720890406, rs717038800, rs519188268, rs520446987, rs716329525, rs520758717, rs109721239, rs474747694, rs109057179, novel_variant (18:56625161), novel_variant (18:56625241), rs1116554007, novel_variant (18:56626568), rs384986101, rs382653606, rs518584340, rs1117090609, rs519154014, rs382905941, rs523196101, rs516696603, rs41893085, rs722746502, rs723342883, rs41893096, rs41893100, rs714491389, rs133206027, rs109883095, rs109955097, rs136949924, rs110220800) (DOI:10.3389/fgene.2022.935238)

Location

18:55770378..55813238 -1