Bos taurus ARS-UCD 1.3

gene: SMARCB1

ID: ENSBTAG00000009988
Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:VGNC Symbol;Acc:VGNC:34991]

DBxRefs: refseq:NP_001035647 refseq:NM_001040557

Mrna: ENSBTAT00000013170
Mrna: ENSBTAT00000079142

  • Gene regulated by SNPs acting as trans-eQTL in muscle sample from Nelore cattle (novel_variant (17:68047274), novel_variant (17:68047302), novel_variant (17:68047328), rs432799992, novel_variant (17:68049132), novel_variant (17:68049267), rs718582705, rs717225800, rs482658641, rs476028310, rs519676513, rs456795468) (DOI:10.3389/fgene.2022.935238)
  • Gene being affected by a cis eQTLs (rs109654236)in Nelore muscle samples (DOI:10.1038/s41598-024-60703-5)
  • Gene being affected by a cis eQTLs (rs517927040, rs520681697, rs798932089, rs519031678, rs209031760, rs209517921, rs3423592445, rs208423389, rs210577328, rs381492792, rs518508609, rs208691619, rs378049749, rs523197615, rs456833299, rs526748149, rs109654236, rs714897490, rs435874751, rs523387873, rs109017017, rs209624384, rs447933433, rs383613546, rs210718538, rs720653501, rs134371532, rs520265067, rs523202643, rs715695923, rs515865015, rs521424516, rs1115789053, rs521474899, rs519909027)in Nelore muscle samples (DOI:10.1038/s41598-024-60703-5)
  • Gene being affected by a trans eQTLs (rs482658641) in Nelore muscle samples (DOI:10.1038/s41598-024-60703-5)
  • Gene regulated by SNPs acting as cis-eQTL in muscle sample from Nelore cattle (rs521424516, rs381492792, rs209786359, rs109017017, rs208423389, rs210577328, rs383613546, rs720653501, novel_variant (17:70511211), rs210810307, rs475358458, rs458339766, rs480512383, rs442825520, rs462961807, rs483052802, rs523303184, rs109766050, rs524187410, rs516253594, rs717774616, rs524931357, rs798932089, rs719351275, rs517927040, rs210695437, rs519031678, rs520681697, rs207880493, rs209031760, rs481098031, rs523197615, rs109654236, rs714928244, rs1115789053, rs209517921, rs207705380, rs378049749, rs718119199, rs41856293, rs519909027, rs523598087, rs515865015, rs714897490, rs715695923, rs1117404869, rs523387873, novel_variant (17:71667345), rs525803806, rs519412957, rs208691619, rs209825870, rs447933433, rs723987883, rs520265067, rs716299053, rs526748149, rs435874751, rs109074249, rs207959882, rs210267951, rs207769062, rs211426708, rs210718538, rs209624384, rs210994386, rs110815919, rs134371532, rs1114932044, rs520279928, rs456833299, rs434019053, rs519368153, rs518808268, rs475448631, rs444102054, rs521029570, rs517703361, rs471566326, rs518508609, rs440251226, novel_variant (17:72129118), rs518922291, rs522555303) (DOI:10.3389/fgene.2022.935238)

Location

17:71241944..71259041 1